Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.5□□□□□ -0.41
Sox2P48432 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox2P48432 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.5□□□□□ -0.41
Sox2P48432 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox2P48432 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Sox2P48432 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.5□□□□□ -0.41
Sox2P48432 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.5□□□□□ -0.41
Sox2P48432 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Sox2P48432 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox2P48432 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.49□□□□□ -0.41
Sox2P48432 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.49□□□□□ -0.41
Sox2P48432 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox2P48432 Gm15770-201ENSMUST00000117498 584 ntBASIC12.49□□□□□ -0.41
Sox2P48432 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox2P48432 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.49□□□□□ -0.41
Sox2P48432 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.49□□□□□ -0.41
Sox2P48432 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sox2P48432 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sox2P48432 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Sox2P48432 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Sox2P48432 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox2P48432 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox2P48432 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox2P48432 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox2P48432 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.48□□□□□ -0.41
Sox2P48432 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms