Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdh4P39038 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh4P39038 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cdh4P39038 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.79□□□□□ -0.36
Cdh4P39038 Gm15806-201ENSMUST00000120696 955 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Gm9002-201ENSMUST00000178437 499 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Gm5745-201ENSMUST00000183748 313 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Gm29608-201ENSMUST00000190444 463 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Gm2495-201ENSMUST00000191160 466 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh4P39038 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
Cdh4P39038 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Cdh4P39038 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Cdh4P39038 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdh4P39038 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdh4P39038 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdh4P39038 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdh4P39038 Gm12928-201ENSMUST00000117115 573 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cdh4P39038 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdh4P39038 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdh4P39038 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Cdh4P39038 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Cdh4P39038 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh4P39038 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.78□□□□□ -0.36
Cdh4P39038 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Cdh4P39038 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.77□□□□□ -0.36
Cdh4P39038 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cdh4P39038 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh4P39038 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh4P39038 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh4P39038 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh4P39038 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdh4P39038 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh4P39038 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms