Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
P01728 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.45□□□□□ -0.74
P01728 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
P01728 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.45□□□□□ -0.74
P01728 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.45□□□□□ -0.74
P01728 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.45□□□□□ -0.74
P01728 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
P01728 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
P01728 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
P01728 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.45□□□□□ -0.74
P01728 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P01728 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01728 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
P01728 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.44□□□□□ -0.74
P01728 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
P01728 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
P01728 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
P01728 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
P01728 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
P01728 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.44□□□□□ -0.74
P01728 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.44□□□□□ -0.74
P01728 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.44□□□□□ -0.74
P01728 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Mir3113-201ENSMUST00000175478 76 ntBASIC10.44□□□□□ -0.74
P01728 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.44□□□□□ -0.74
P01728 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.44□□□□□ -0.74
P01728 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
P01728 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
P01728 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
P01728 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01728 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
P01728 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P01728 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
P01728 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.43□□□□□ -0.74
P01728 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.43□□□□□ -0.74
P01728 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.43□□□□□ -0.74
P01728 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.43□□□□□ -0.74
P01728 Gm44771-201ENSMUST00000206975 626 ntBASIC10.43□□□□□ -0.74
P01728 Gm18206-201ENSMUST00000207027 926 ntBASIC10.43□□□□□ -0.74
P01728 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.43□□□□□ -0.74
P01728 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.43□□□□□ -0.74
P01728 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.43□□□□□ -0.74
P01728 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.43□□□□□ -0.74
P01728 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01728 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.43□□□□□ -0.74
P01728 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
P01728 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms