Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.4□□□□□ -0.1
Vti1aO89116 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.4□□□□□ -0.1
Vti1aO89116 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.4□□□□□ -0.1
Vti1aO89116 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vti1aO89116 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vti1aO89116 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.39□□□□□ -0.11
Vti1aO89116 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Vti1aO89116 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Gm6152-201ENSMUST00000151704 340 ntBASIC14.39□□□□□ -0.11
Vti1aO89116 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.39□□□□□ -0.11
Vti1aO89116 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.39□□□□□ -0.11
Vti1aO89116 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Vti1aO89116 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Gm24196-201ENSMUST00000179161 110 ntBASIC14.39□□□□□ -0.11
Vti1aO89116 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.39□□□□□ -0.11
Vti1aO89116 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Vti1aO89116 Gm18473-201ENSMUST00000220543 868 ntBASIC14.39□□□□□ -0.11
Vti1aO89116 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1aO89116 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vti1aO89116 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.38□□□□□ -0.11
Vti1aO89116 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.38□□□□□ -0.11
Vti1aO89116 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vti1aO89116 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.38□□□□□ -0.11
Vti1aO89116 Gm11803-201ENSMUST00000119966 444 ntBASIC14.38□□□□□ -0.11
Vti1aO89116 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Vti1aO89116 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Gm8810-201ENSMUST00000172895 754 ntBASIC14.38□□□□□ -0.11
Vti1aO89116 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vti1aO89116 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.38□□□□□ -0.11
Vti1aO89116 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.38□□□□□ -0.11
Vti1aO89116 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.38□□□□□ -0.11
Vti1aO89116 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vti1aO89116 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.38□□□□□ -0.11
Vti1aO89116 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.38□□□□□ -0.11
Vti1aO89116 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vti1aO89116 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vti1aO89116 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1aO89116 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Vti1aO89116 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1aO89116 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1aO89116 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Vti1aO89116 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vti1aO89116 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.37□□□□□ -0.11
Vti1aO89116 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.37□□□□□ -0.11
Vti1aO89116 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vti1aO89116 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms