Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Itgb3O54890 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Itgb3O54890 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Itgb3O54890 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.14□□□□□ -0.15
Itgb3O54890 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.14□□□□□ -0.15
Itgb3O54890 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Itgb3O54890 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Itgb3O54890 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Mir1982-201ENSMUST00000157368 74 ntBASIC14.14□□□□□ -0.15
Itgb3O54890 Gm27331-201ENSMUST00000183705 60 ntBASIC14.14□□□□□ -0.15
Itgb3O54890 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.14□□□□□ -0.15
Itgb3O54890 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.14□□□□□ -0.15
Itgb3O54890 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Itgb3O54890 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Itgb3O54890 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Itgb3O54890 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Itgb3O54890 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Itgb3O54890 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Itgb3O54890 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Itgb3O54890 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Itgb3O54890 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Gm13226-201ENSMUST00000117838 404 ntBASIC14.13□□□□□ -0.15
Itgb3O54890 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Itgb3O54890 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.13□□□□□ -0.15
Itgb3O54890 Gm29705-201ENSMUST00000212598 474 ntBASIC14.13□□□□□ -0.15
Itgb3O54890 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Itgb3O54890 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Itgb3O54890 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Itgb3O54890 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.13□□□□□ -0.15
Itgb3O54890 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Itgb3O54890 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Itgb3O54890 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.12□□□□□ -0.15
Itgb3O54890 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Itgb3O54890 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.12□□□□□ -0.15
Itgb3O54890 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Itgb3O54890 Gm16202-201ENSMUST00000117532 544 ntBASIC14.12□□□□□ -0.15
Itgb3O54890 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.12□□□□□ -0.15
Itgb3O54890 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.12□□□□□ -0.15
Itgb3O54890 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.12□□□□□ -0.15
Itgb3O54890 Gm44069-201ENSMUST00000204898 506 ntBASIC14.12□□□□□ -0.15
Itgb3O54890 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.12□□□□□ -0.15
Itgb3O54890 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.12□□□□□ -0.15
Itgb3O54890 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms