Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm22171-201ENSMUST00000179283 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm23936-201ENSMUST00000179354 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm22619-201ENSMUST00000179516 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm25255-201ENSMUST00000179579 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24755-201ENSMUST00000179691 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm26506-201ENSMUST00000179692 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm25086-201ENSMUST00000179931 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm23243-201ENSMUST00000180047 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24659-201ENSMUST00000180212 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24169-201ENSMUST00000180244 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm23689-201ENSMUST00000180354 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm27359-201ENSMUST00000184153 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm27785-201ENSMUST00000184268 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm27466-201ENSMUST00000184396 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm27703-201ENSMUST00000184836 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm44335-201ENSMUST00000196879 141 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm44297-201ENSMUST00000198304 141 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm44346-201ENSMUST00000198851 141 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm5312-201ENSMUST00000203728 547 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm18049-201ENSMUST00000208909 581 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Efnb3O35393 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Efnb3O35393 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.56□□□□□ -0.72
Efnb3O35393 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.56□□□□□ -0.72
Efnb3O35393 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.56□□□□□ -0.72
Efnb3O35393 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm9824-201ENSMUST00000178707 561 ntBASIC10.56□□□□□ -0.72
Efnb3O35393 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm43474-201ENSMUST00000196415 774 ntBASIC10.56□□□□□ -0.72
Efnb3O35393 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.56□□□□□ -0.72
Efnb3O35393 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Efnb3O35393 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Efnb3O35393 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Efnb3O35393 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Efnb3O35393 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.56□□□□□ -0.72
Efnb3O35393 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.56□□□□□ -0.72
Efnb3O35393 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Efnb3O35393 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Efnb3O35393 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Efnb3O35393 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.56□□□□□ -0.72
Efnb3O35393 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.56□□□□□ -0.72
Efnb3O35393 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms