Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Gm27486-201ENSMUST00000184923 80 ntBASIC14.37□□□□□ -0.11
Usp35M0QWN7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Mir497b-201ENSMUST00000093601 125 ntBASIC14.37□□□□□ -0.11
Usp35M0QWN7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp35M0QWN7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Usp35M0QWN7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Gm12928-201ENSMUST00000117115 573 ntBASIC14.36□□□□□ -0.11
Usp35M0QWN7 Gm12390-201ENSMUST00000117897 397 ntBASIC14.36□□□□□ -0.11
Usp35M0QWN7 Mir1982-201ENSMUST00000157368 74 ntBASIC14.36□□□□□ -0.11
Usp35M0QWN7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Gm7287-201ENSMUST00000205267 602 ntBASIC14.36□□□□□ -0.11
Usp35M0QWN7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp35M0QWN7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.36□□□□□ -0.11
Usp35M0QWN7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.36□□□□□ -0.11
Usp35M0QWN7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.36□□□□□ -0.11
Usp35M0QWN7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp35M0QWN7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Gm12485-201ENSMUST00000119641 291 ntBASIC14.35□□□□□ -0.11
Usp35M0QWN7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.35□□□□□ -0.11
Usp35M0QWN7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms