Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm8805-201ENSMUST00000117848 313 ntBASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm14660-201ENSMUST00000119809 575 ntBASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb9E9Q5G2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Gm27731-201ENSMUST00000185192 107 ntBASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb9E9Q5G2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Gm45784-201ENSMUST00000188360 142 ntBASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Gm43818-201ENSMUST00000200605 466 ntBASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms