Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Gm13123-201ENSMUST00000122173 492 ntBASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Gm11978-201ENSMUST00000122315 466 ntBASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Gm45684-201ENSMUST00000210244 1571 ntBASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Gm18244-201ENSMUST00000219747 1566 ntBASIC18.04■□□□□ 0.48
Tmf1B9EKI3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Gm4271-201ENSMUST00000174444 973 ntBASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Gm38577-201ENSMUST00000221531 4545 ntBASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tmf1B9EKI3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm13226-201ENSMUST00000117838 404 ntBASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm5466-201ENSMUST00000119395 1890 ntBASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm13369-201ENSMUST00000119442 987 ntBASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC18.02■□□□□ 0.48
Tmf1B9EKI3 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tmf1B9EKI3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tmf1B9EKI3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Tmf1B9EKI3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Tmf1B9EKI3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tmf1B9EKI3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tmf1B9EKI3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tmf1B9EKI3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms