Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm11524-201ENSMUST00000119349 807 ntBASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm27437-201ENSMUST00000183429 107 ntBASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lnp1A0A1B0GSK3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm17330-201ENSMUST00000221047 165 ntBASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms