Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Gm5425-201ENSMUST00000214125 459 ntBASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5-4A0A075B652 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Gm24420-201ENSMUST00000176676 59 ntBASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Gm27321-201ENSMUST00000185021 205 ntBASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trav5-4A0A075B652 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5-4A0A075B652 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms