Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Gm15376-201ENSMUST00000122258 783 ntBASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Gm5354-201ENSMUST00000182417 973 ntBASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldn9Q9Z0S7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Gm16215-201ENSMUST00000161990 637 ntBASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cldn9Q9Z0S7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn9Q9Z0S7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms