Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Gm19309-201ENSMUST00000218295 205 ntBASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcb1Q9Z0H3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcb1Q9Z0H3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Mir874-201ENSMUST00000104769 76 ntBASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Gm16379-201ENSMUST00000161469 348 ntBASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Gm8762-201ENSMUST00000193486 339 ntBASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Gm19184-201ENSMUST00000196798 928 ntBASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Gm6013-201ENSMUST00000212264 699 ntBASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcb1Q9Z0H3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gm8805-201ENSMUST00000117848 313 ntBASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms