Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm8385-201ENSMUST00000058999 643 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-4Q9EQM3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gm23200-201ENSMUST00000104379 132 ntBASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gm7593-201ENSMUST00000187246 644 ntBASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gm6458-201ENSMUST00000211573 635 ntBASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-4Q9EQM3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms