Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rrp8Q9DB85 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rrp8Q9DB85 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm13786-201ENSMUST00000122371 333 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm26185-201ENSMUST00000157692 266 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm29199-201ENSMUST00000187766 775 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rrp8Q9DB85 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Gm6222-202ENSMUST00000182143 629 ntBASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Gm37466-201ENSMUST00000195692 652 ntBASIC13.07□□□□□ -0.32
Rrp8Q9DB85 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rrp8Q9DB85 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms