Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.82□□□□□ -0.2
Nop56Q9D6Z1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Syt7-205ENSMUST00000224135 1557 ntBASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nop56Q9D6Z1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.8□□□□□ -0.2
Nop56Q9D6Z1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nop56Q9D6Z1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms