Protein–RNA interactions for Protein: Q9CZT6

Cmss1, Protein CMSS1, mousemouse

Known RBP Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmss1Q9CZT6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cmss1Q9CZT6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Gm5177-201ENSMUST00000183092 997 ntBASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cmss1Q9CZT6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Gm9103-201ENSMUST00000119371 405 ntBASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cmss1Q9CZT6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.65□□□□□ -0.54
Cmss1Q9CZT6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms