Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Ssr1-204ENSMUST00000225319 1610 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm12384-201ENSMUST00000119228 919 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm13612-201ENSMUST00000119276 390 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm2639-201ENSMUST00000156881 1297 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm27731-201ENSMUST00000185192 107 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm9124-201ENSMUST00000191789 1092 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm9113-201ENSMUST00000192510 1018 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm38144-201ENSMUST00000192790 465 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm9131-201ENSMUST00000193557 1089 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm9121-201ENSMUST00000193749 1071 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm4971-201ENSMUST00000205991 1108 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm6007-201ENSMUST00000208170 823 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 AC158388.1-201ENSMUST00000225441 256 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm16372-201ENSMUST00000073088 450 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm5161-201ENSMUST00000075243 853 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Mir497b-201ENSMUST00000093601 125 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm6198-201ENSMUST00000191337 2929 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm12846-201ENSMUST00000120431 1373 ntBASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sec61bQ9CQS8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
Sec61bQ9CQS8 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Sec61bQ9CQS8 Gm45546-201ENSMUST00000211053 2394 ntBASIC7.27□□□□□ -1.24
Sec61bQ9CQS8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
Sec61bQ9CQS8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Gm16011-201ENSMUST00000121567 2662 ntBASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sec61bQ9CQS8 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms