Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gm5687-201ENSMUST00000118252 640 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Itm2b-204ENSMUST00000228637 783 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gm26315-201ENSMUST00000083890 321 ntBASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.98□□□□□ -0.65
Prpf8Q99PV0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Mir7070-201ENSMUST00000183657 86 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm43822-201ENSMUST00000200285 476 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm7783-201ENSMUST00000204795 781 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prpf8Q99PV0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms