Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm10175-201ENSMUST00000086013 645 ntBASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm5566-201ENSMUST00000116118 459 ntBASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Dupd1-202ENSMUST00000224735 548 ntBASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cttnbp2nlQ99LJ0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cttnbp2nlQ99LJ0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms