Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.21□□□□□ -0.45
Lims1Q99JW4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Gm24447-201ENSMUST00000083977 338 ntBASIC12.21□□□□□ -0.45
Lims1Q99JW4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lims1Q99JW4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.21□□□□□ -0.46
Lims1Q99JW4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lims1Q99JW4 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.21□□□□□ -0.46
Lims1Q99JW4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Gm4875-201ENSMUST00000118257 786 ntBASIC12.2□□□□□ -0.46
Lims1Q99JW4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Gm7775-201ENSMUST00000218871 853 ntBASIC12.2□□□□□ -0.46
Lims1Q99JW4 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.2□□□□□ -0.46
Lims1Q99JW4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.2□□□□□ -0.46
Lims1Q99JW4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.2□□□□□ -0.46
Lims1Q99JW4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lims1Q99JW4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms