Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Gm7488-201ENSMUST00000117148 684 ntBASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm15371-201ENSMUST00000117057 784 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm18307-201ENSMUST00000206864 949 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Gm2423-201ENSMUST00000074863 733 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb1Q91Y08 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb1Q91Y08 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhb1Q91Y08 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gm12859-201ENSMUST00000117834 427 ntBASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gm13689-201ENSMUST00000119360 685 ntBASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gm37917-201ENSMUST00000194711 392 ntBASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.89□□□□□ -0.19
Pcdhb1Q91Y08 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms