Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 AC140209.1-201ENSMUST00000227875 284 ntBASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb3Q91XZ7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm2810-201ENSMUST00000118681 990 ntBASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm22175-201ENSMUST00000175007 78 ntBASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm27920-201ENSMUST00000183953 96 ntBASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm27430-201ENSMUST00000184585 107 ntBASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm29747-201ENSMUST00000194764 585 ntBASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm44333-201ENSMUST00000197168 107 ntBASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb3Q91XZ7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms