Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm8213-201ENSMUST00000118191 441 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm1335-201ENSMUST00000121653 386 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm38341-201ENSMUST00000195357 515 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm18935-201ENSMUST00000212692 664 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm9368-201ENSMUST00000219348 831 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga6Q91XY2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gm8810-201ENSMUST00000172895 754 ntBASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga6Q91XY2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga6Q91XY2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga6Q91XY2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga6Q91XY2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga6Q91XY2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga6Q91XY2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga6Q91XY2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms