Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Gm15678-201ENSMUST00000117573 960 ntBASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Gm27989-201ENSMUST00000184721 107 ntBASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps39Q8R5L3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Gm9522-201ENSMUST00000182394 926 ntBASIC13.4□□□□□ -0.26
Vps39Q8R5L3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Gm20445-201ENSMUST00000061905 565 ntBASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps39Q8R5L3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vps39Q8R5L3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Vps39Q8R5L3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Vps39Q8R5L3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.39□□□□□ -0.27
Vps39Q8R5L3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Gm27838-201ENSMUST00000184829 128 ntBASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Gm44872-201ENSMUST00000207864 420 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms