Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slf1Q8R3P9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.51□□□□□ -0.25
Slf1Q8R3P9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Slf1Q8R3P9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slf1Q8R3P9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms