Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Gm8908-201ENSMUST00000121633 1024 ntBASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Gm7003-201ENSMUST00000195089 312 ntBASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx54Q8K4L0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm5070-201ENSMUST00000177599 862 ntBASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm44551-201ENSMUST00000208804 171 ntBASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Gm45433-201ENSMUST00000209386 247 ntBASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.35■□□□□ 0.37
Ddx54Q8K4L0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Gm9555-201ENSMUST00000200908 583 ntBASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Gm45495-201ENSMUST00000200940 1700 ntBASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 AC154276.3-201ENSMUST00000227643 998 ntBASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx54Q8K4L0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx54Q8K4L0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms