Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm12485-201ENSMUST00000119641 291 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm12403-201ENSMUST00000121384 959 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Mir6956-201ENSMUST00000183598 62 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Mir7684-201ENSMUST00000183858 60 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm27989-201ENSMUST00000184721 107 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm27838-201ENSMUST00000184829 128 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Gm38144-201ENSMUST00000192790 465 ntBASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cchcr1Q8K2I2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cchcr1Q8K2I2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cchcr1Q8K2I2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cchcr1Q8K2I2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cchcr1Q8K2I2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Mir8102-201ENSMUST00000184148 139 ntBASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Gm5279-201ENSMUST00000199575 745 ntBASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms