Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc60Q8C4J0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Gm5687-201ENSMUST00000118252 640 ntBASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Itm2b-204ENSMUST00000228637 783 ntBASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc60Q8C4J0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Gm6447-201ENSMUST00000118905 835 ntBASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Gm6152-201ENSMUST00000151704 340 ntBASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc60Q8C4J0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc60Q8C4J0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms