Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Gm4986-201ENSMUST00000119731 549 ntBASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Rps4l-202ENSMUST00000204242 789 ntBASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Gm16505-201ENSMUST00000179981 232 ntBASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.43■□□□□ 0.22
Ptcd1Q8C2E4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Gm22902-201ENSMUST00000158488 302 ntBASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Gm7046-201ENSMUST00000221351 977 ntBASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptcd1Q8C2E4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms