Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Gm44719-201ENSMUST00000206404 149 ntBASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4Q8BQZ5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gm15240-201ENSMUST00000118156 720 ntBASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gm17795-201ENSMUST00000214505 757 ntBASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf4Q8BQZ5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Gm8927-201ENSMUST00000181978 981 ntBASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Gm3222-201ENSMUST00000071282 990 ntBASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpsf4Q8BQZ5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms