Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Gm12585-201ENSMUST00000117307 290 ntBASIC14.36□□□□□ -0.11
Nop53Q8BK35 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Gm24420-201ENSMUST00000176676 59 ntBASIC14.36□□□□□ -0.11
Nop53Q8BK35 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.36□□□□□ -0.11
Nop53Q8BK35 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nop53Q8BK35 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.35□□□□□ -0.11
Nop53Q8BK35 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.35□□□□□ -0.11
Nop53Q8BK35 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.35□□□□□ -0.11
Nop53Q8BK35 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Gm10766-202ENSMUST00000194123 606 ntBASIC14.35□□□□□ -0.11
Nop53Q8BK35 Gm7775-201ENSMUST00000218871 853 ntBASIC14.35□□□□□ -0.11
Nop53Q8BK35 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.35□□□□□ -0.11
Nop53Q8BK35 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nop53Q8BK35 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop53Q8BK35 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.34□□□□□ -0.11
Nop53Q8BK35 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Gm15770-201ENSMUST00000117498 584 ntBASIC14.34□□□□□ -0.11
Nop53Q8BK35 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nop53Q8BK35 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms