Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Gm18737-201ENSMUST00000173594 937 ntBASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc5a7Q8BGY9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Mir5131-201ENSMUST00000175426 93 ntBASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc5a7Q8BGY9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Gm2810-201ENSMUST00000118681 990 ntBASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Mir7221-201ENSMUST00000184009 72 ntBASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Gm27631-201ENSMUST00000184163 466 ntBASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Gm20553-201ENSMUST00000204205 844 ntBASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc5a7Q8BGY9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms