Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc116Q80X53 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc116Q80X53 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.13□□□□□ -0.31
Ccdc116Q80X53 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc116Q80X53 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm28760-201ENSMUST00000185995 736 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm29608-201ENSMUST00000190444 463 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm42612-201ENSMUST00000197986 623 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm43170-201ENSMUST00000199827 612 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm20949-201ENSMUST00000206478 952 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc116Q80X53 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Gm11524-201ENSMUST00000119349 807 ntBASIC13.11□□□□□ -0.31
Ccdc116Q80X53 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Gm7730-201ENSMUST00000212486 454 ntBASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc116Q80X53 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc116Q80X53 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms