Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Gm7857-201ENSMUST00000117957 358 ntBASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Gm23200-201ENSMUST00000104379 132 ntBASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Gm43823-201ENSMUST00000197391 1808 ntBASIC17.13■□□□□ 0.33
Chd4Q6PDQ2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd4Q6PDQ2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm15547-201ENSMUST00000122152 333 ntBASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm8385-201ENSMUST00000058999 643 ntBASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gm16505-201ENSMUST00000179981 232 ntBASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd4Q6PDQ2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd4Q6PDQ2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms