Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm12585-201ENSMUST00000117307 290 ntBASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm24420-201ENSMUST00000176676 59 ntBASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd3Q6P9Z1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd3Q6P9Z1 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Smarcd3Q6P9Z1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd3Q6P9Z1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms