Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox17Q61473 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox17Q61473 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.53□□□□□ -0.4
Sox17Q61473 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Sox17Q61473 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox17Q61473 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sox17Q61473 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Mir8117-201ENSMUST00000184773 107 ntBASIC12.53□□□□□ -0.4
Sox17Q61473 Gm29541-201ENSMUST00000191351 678 ntBASIC12.53□□□□□ -0.4
Sox17Q61473 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Sox17Q61473 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Sox17Q61473 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Sox17Q61473 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Sox17Q61473 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox17Q61473 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.52□□□□□ -0.4
Sox17Q61473 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.52□□□□□ -0.4
Sox17Q61473 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox17Q61473 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Gm12428-201ENSMUST00000119844 727 ntBASIC12.52□□□□□ -0.41
Sox17Q61473 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.52□□□□□ -0.41
Sox17Q61473 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sox17Q61473 Gm1401-201ENSMUST00000122048 772 ntBASIC12.52□□□□□ -0.41
Sox17Q61473 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.52□□□□□ -0.41
Sox17Q61473 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Sox17Q61473 Gm8927-201ENSMUST00000181978 981 ntBASIC12.52□□□□□ -0.41
Sox17Q61473 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox17Q61473 Gm18049-201ENSMUST00000208909 581 ntBASIC12.52□□□□□ -0.41
Sox17Q61473 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.52□□□□□ -0.41
Sox17Q61473 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Gm3222-201ENSMUST00000071282 990 ntBASIC12.52□□□□□ -0.41
Sox17Q61473 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox17Q61473 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox17Q61473 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox17Q61473 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox17Q61473 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox17Q61473 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Sox17Q61473 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms