Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ClpbQ60649 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ClpbQ60649 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
ClpbQ60649 Gm11918-201ENSMUST00000121660 179 ntBASIC12.86□□□□□ -0.35
ClpbQ60649 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.86□□□□□ -0.35
ClpbQ60649 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.86□□□□□ -0.35
ClpbQ60649 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.86□□□□□ -0.35
ClpbQ60649 Gm18307-201ENSMUST00000206864 949 ntBASIC12.86□□□□□ -0.35
ClpbQ60649 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.86□□□□□ -0.35
ClpbQ60649 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
ClpbQ60649 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ClpbQ60649 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ClpbQ60649 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.86□□□□□ -0.35
ClpbQ60649 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClpbQ60649 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ClpbQ60649 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.85□□□□□ -0.35
ClpbQ60649 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.85□□□□□ -0.35
ClpbQ60649 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.85□□□□□ -0.35
ClpbQ60649 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.85□□□□□ -0.35
ClpbQ60649 Gm11478-201ENSMUST00000117851 599 ntBASIC12.85□□□□□ -0.35
ClpbQ60649 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.85□□□□□ -0.35
ClpbQ60649 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
ClpbQ60649 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.85□□□□□ -0.35
ClpbQ60649 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.85□□□□□ -0.35
ClpbQ60649 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ClpbQ60649 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ClpbQ60649 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.85□□□□□ -0.35
ClpbQ60649 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ClpbQ60649 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.85□□□□□ -0.35
ClpbQ60649 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.84□□□□□ -0.35
ClpbQ60649 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.84□□□□□ -0.35
ClpbQ60649 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
ClpbQ60649 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.84□□□□□ -0.35
ClpbQ60649 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.84□□□□□ -0.35
ClpbQ60649 Gm45384-201ENSMUST00000210451 277 ntBASIC12.84□□□□□ -0.35
ClpbQ60649 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.84□□□□□ -0.35
ClpbQ60649 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.84□□□□□ -0.35
ClpbQ60649 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ClpbQ60649 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.84□□□□□ -0.35
ClpbQ60649 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ClpbQ60649 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms