Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
R3hdm4Q4VBF2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
R3hdm4Q4VBF2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
R3hdm4Q4VBF2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gm11803-201ENSMUST00000119966 444 ntBASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gm27839-201ENSMUST00000184242 106 ntBASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.39□□□□□ -0.11
R3hdm4Q4VBF2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
R3hdm4Q4VBF2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
R3hdm4Q4VBF2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
R3hdm4Q4VBF2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.38□□□□□ -0.11
R3hdm4Q4VBF2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms