Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Ddx49Q4FZF3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Gm7046-201ENSMUST00000221351 977 ntBASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx49Q4FZF3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm4986-201ENSMUST00000119731 549 ntBASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm11591-201ENSMUST00000120063 702 ntBASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm20482-202ENSMUST00000174729 825 ntBASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.55■□□□□ 0.08
Ddx49Q4FZF3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx49Q4FZF3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms