Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Syne3Q4FZC9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.21□□□□□ -0.13
Syne3Q4FZC9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne3Q4FZC9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Syne3Q4FZC9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.21□□□□□ -0.14
Syne3Q4FZC9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syne3Q4FZC9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Syne3Q4FZC9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syne3Q4FZC9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syne3Q4FZC9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syne3Q4FZC9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Syne3Q4FZC9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne3Q4FZC9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms