Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12□□□□□ -0.49
Pkd1l3Q2EG98 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm37497-201ENSMUST00000195830 798 ntBASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm10146-201ENSMUST00000072739 309 ntBASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd1l3Q2EG98 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm16372-201ENSMUST00000073088 450 ntBASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm5687-201ENSMUST00000118252 640 ntBASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Gm12134-201ENSMUST00000122109 520 ntBASIC11.98□□□□□ -0.49
Pkd1l3Q2EG98 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms