Protein–RNA interactions for Protein: Q0P523

Cib3, Calcium and integrin-binding family member 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cib3Q0P523 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.07□□□□□ -0.8
Cib3Q0P523 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Gm15165-201ENSMUST00000118140 502 ntBASIC10.07□□□□□ -0.8
Cib3Q0P523 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Gm18489-201ENSMUST00000172565 551 ntBASIC10.07□□□□□ -0.8
Cib3Q0P523 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Olfr286-202ENSMUST00000205305 969 ntBASIC10.07□□□□□ -0.8
Cib3Q0P523 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.07□□□□□ -0.8
Cib3Q0P523 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.07□□□□□ -0.8
Cib3Q0P523 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cib3Q0P523 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Cib3Q0P523 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.06□□□□□ -0.8
Cib3Q0P523 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Syt7-205ENSMUST00000224135 1557 ntBASIC10.06□□□□□ -0.8
Cib3Q0P523 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.06□□□□□ -0.8
Cib3Q0P523 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.06□□□□□ -0.8
Cib3Q0P523 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.06□□□□□ -0.8
Cib3Q0P523 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.06□□□□□ -0.8
Cib3Q0P523 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cib3Q0P523 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cib3Q0P523 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Cib3Q0P523 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cib3Q0P523 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms