Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Msx2Q03358 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Msx2Q03358 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.97□□□□□ -0.33
Msx2Q03358 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.97□□□□□ -0.33
Msx2Q03358 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Msx2Q03358 Gm18049-201ENSMUST00000208909 581 ntBASIC12.97□□□□□ -0.33
Msx2Q03358 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Msx2Q03358 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Msx2Q03358 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Msx2Q03358 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Msx2Q03358 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.97□□□□□ -0.33
Msx2Q03358 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Msx2Q03358 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx2Q03358 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Msx2Q03358 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.96□□□□□ -0.33
Msx2Q03358 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Msx2Q03358 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.96□□□□□ -0.33
Msx2Q03358 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Msx2Q03358 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Msx2Q03358 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Msx2Q03358 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.96□□□□□ -0.33
Msx2Q03358 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.96□□□□□ -0.33
Msx2Q03358 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.96□□□□□ -0.33
Msx2Q03358 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Rprl2-201ENSMUST00000157150 290 ntBASIC12.96□□□□□ -0.33
Msx2Q03358 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Gm18766-201ENSMUST00000189811 808 ntBASIC12.96□□□□□ -0.33
Msx2Q03358 Gm29541-201ENSMUST00000191351 678 ntBASIC12.96□□□□□ -0.33
Msx2Q03358 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.96□□□□□ -0.33
Msx2Q03358 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.96□□□□□ -0.33
Msx2Q03358 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx2Q03358 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msx2Q03358 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Msx2Q03358 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msx2Q03358 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msx2Q03358 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.96□□□□□ -0.34
Msx2Q03358 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Msx2Q03358 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Msx2Q03358 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Msx2Q03358 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Msx2Q03358 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Msx2Q03358 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Msx2Q03358 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Msx2Q03358 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Gm12428-201ENSMUST00000119844 727 ntBASIC12.95□□□□□ -0.34
Msx2Q03358 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Msx2Q03358 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.95□□□□□ -0.34
Msx2Q03358 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.95□□□□□ -0.34
Msx2Q03358 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.95□□□□□ -0.34
Msx2Q03358 Dupd1-202ENSMUST00000224735 548 ntBASIC12.95□□□□□ -0.34
Msx2Q03358 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Msx2Q03358 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.95□□□□□ -0.34
Msx2Q03358 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.95□□□□□ -0.34
Msx2Q03358 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx2Q03358 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms