Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Gm14042-201ENSMUST00000120139 833 ntBASIC7.74□□□□□ -1.17
Rps28P62858 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 AC137127.1-201ENSMUST00000213466 1078 ntBASIC7.74□□□□□ -1.17
Rps28P62858 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Rps28P62858 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC7.74□□□□□ -1.17
Rps28P62858 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 AC165148.1-201ENSMUST00000224795 2372 ntBASIC7.74□□□□□ -1.17
Rps28P62858 AC154171.3-201ENSMUST00000224519 2505 ntBASIC7.74□□□□□ -1.17
Rps28P62858 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rps28P62858 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC7.73□□□□□ -1.17
Rps28P62858 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Rps28P62858 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Gm42608-201ENSMUST00000197563 2018 ntBASIC7.73□□□□□ -1.17
Rps28P62858 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC7.73□□□□□ -1.17
Rps28P62858 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Gm5847-201ENSMUST00000178959 1595 ntBASIC7.73□□□□□ -1.17
Rps28P62858 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC7.73□□□□□ -1.17
Rps28P62858 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC7.73□□□□□ -1.17
Rps28P62858 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Rps28P62858 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC7.73□□□□□ -1.17
Rps28P62858 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Rps28P62858 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC7.73□□□□□ -1.17
Rps28P62858 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Rps28P62858 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rps28P62858 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rps28P62858 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rps28P62858 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC7.72□□□□□ -1.17
Rps28P62858 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Rps28P62858 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rps28P62858 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms