Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Gm24158-201ENSMUST00000175263 71 ntBASIC10.81□□□□□ -0.68
Sssca1P56873 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.81□□□□□ -0.68
Sssca1P56873 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sssca1P56873 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.81□□□□□ -0.68
Sssca1P56873 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Sssca1P56873 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sssca1P56873 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Sssca1P56873 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Sssca1P56873 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.8□□□□□ -0.68
Sssca1P56873 Mir1897-201ENSMUST00000122581 272 ntBASIC10.8□□□□□ -0.68
Sssca1P56873 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.8□□□□□ -0.68
Sssca1P56873 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Sssca1P56873 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Gm4804-201ENSMUST00000182234 999 ntBASIC10.8□□□□□ -0.68
Sssca1P56873 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sssca1P56873 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Sssca1P56873 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sssca1P56873 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Sssca1P56873 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.8□□□□□ -0.68
Sssca1P56873 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Sssca1P56873 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sssca1P56873 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.8□□□□□ -0.68
Sssca1P56873 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.79□□□□□ -0.68
Sssca1P56873 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sssca1P56873 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Gm15770-201ENSMUST00000117498 584 ntBASIC10.79□□□□□ -0.68
Sssca1P56873 Gm15653-201ENSMUST00000119247 907 ntBASIC10.79□□□□□ -0.68
Sssca1P56873 Gm12428-201ENSMUST00000119844 727 ntBASIC10.79□□□□□ -0.68
Sssca1P56873 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.79□□□□□ -0.68
Sssca1P56873 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Gm8000-201ENSMUST00000188378 592 ntBASIC10.79□□□□□ -0.68
Sssca1P56873 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Sssca1P56873 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.79□□□□□ -0.68
Sssca1P56873 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.79□□□□□ -0.68
Sssca1P56873 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.79□□□□□ -0.68
Sssca1P56873 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms