Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abcd3P55096 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abcd3P55096 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abcd3P55096 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abcd3P55096 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Abcd3P55096 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Abcd3P55096 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.98□□□□□ -0.49
Abcd3P55096 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.98□□□□□ -0.49
Abcd3P55096 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.98□□□□□ -0.49
Abcd3P55096 Gm5354-201ENSMUST00000182417 973 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 Gm38144-201ENSMUST00000192790 465 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 Gm42612-201ENSMUST00000197986 623 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 Gm43170-201ENSMUST00000199827 612 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 Gm45841-201ENSMUST00000207700 164 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Abcd3P55096 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abcd3P55096 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Abcd3P55096 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.98□□□□□ -0.49
Abcd3P55096 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Abcd3P55096 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.97□□□□□ -0.49
Abcd3P55096 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.97□□□□□ -0.49
Abcd3P55096 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.97□□□□□ -0.49
Abcd3P55096 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.97□□□□□ -0.49
Abcd3P55096 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.97□□□□□ -0.49
Abcd3P55096 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Abcd3P55096 Gm7730-201ENSMUST00000212486 454 ntBASIC11.97□□□□□ -0.49
Abcd3P55096 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Abcd3P55096 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.97□□□□□ -0.49
Abcd3P55096 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abcd3P55096 Syt7-205ENSMUST00000224135 1557 ntBASIC11.96□□□□□ -0.49
Abcd3P55096 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Abcd3P55096 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.96□□□□□ -0.49
Abcd3P55096 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.96□□□□□ -0.49
Abcd3P55096 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Abcd3P55096 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Abcd3P55096 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.96□□□□□ -0.49
Abcd3P55096 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Abcd3P55096 Mir7221-201ENSMUST00000184009 72 ntBASIC11.96□□□□□ -0.49
Abcd3P55096 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Abcd3P55096 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Abcd3P55096 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms