Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.84□□□□□ -0.35
Sox3P53784 Gm12928-201ENSMUST00000117115 573 ntBASIC12.84□□□□□ -0.35
Sox3P53784 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox3P53784 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.84□□□□□ -0.35
Sox3P53784 Gm15429-201ENSMUST00000151268 798 ntBASIC12.84□□□□□ -0.35
Sox3P53784 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Mir5132-201ENSMUST00000175166 71 ntBASIC12.84□□□□□ -0.35
Sox3P53784 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Gm37230-201ENSMUST00000194491 818 ntBASIC12.84□□□□□ -0.35
Sox3P53784 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Sox3P53784 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.84□□□□□ -0.35
Sox3P53784 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.84□□□□□ -0.35
Sox3P53784 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox3P53784 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.83□□□□□ -0.36
Sox3P53784 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Gm24196-201ENSMUST00000179161 110 ntBASIC12.83□□□□□ -0.36
Sox3P53784 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Gm37714-201ENSMUST00000194742 342 ntBASIC12.83□□□□□ -0.36
Sox3P53784 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Gm18753-201ENSMUST00000201000 566 ntBASIC12.83□□□□□ -0.36
Sox3P53784 Gm7783-201ENSMUST00000204795 781 ntBASIC12.83□□□□□ -0.36
Sox3P53784 Gm40466-201ENSMUST00000212174 422 ntBASIC12.83□□□□□ -0.36
Sox3P53784 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox3P53784 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox3P53784 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox3P53784 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox3P53784 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox3P53784 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.82□□□□□ -0.36
Sox3P53784 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox3P53784 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Olfr286-202ENSMUST00000205305 969 ntBASIC12.82□□□□□ -0.36
Sox3P53784 Gm9182-201ENSMUST00000217829 639 ntBASIC12.82□□□□□ -0.36
Sox3P53784 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Gm19309-201ENSMUST00000218295 205 ntBASIC12.82□□□□□ -0.36
Sox3P53784 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox3P53784 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms