Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Grk6-205ENSMUST00000224653 2976 ntBASIC14.09□□□□□ -0.15
SftpdP50404 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SftpdP50404 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SftpdP50404 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SftpdP50404 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SftpdP50404 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SftpdP50404 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.08□□□□□ -0.16
SftpdP50404 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.08□□□□□ -0.16
SftpdP50404 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.08□□□□□ -0.16
SftpdP50404 Gm27701-201ENSMUST00000184498 110 ntBASIC14.08□□□□□ -0.16
SftpdP50404 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.08□□□□□ -0.16
SftpdP50404 Gm6745-201ENSMUST00000199216 526 ntBASIC14.08□□□□□ -0.16
SftpdP50404 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.08□□□□□ -0.16
SftpdP50404 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.08□□□□□ -0.16
SftpdP50404 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.08□□□□□ -0.16
SftpdP50404 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.08□□□□□ -0.16
SftpdP50404 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SftpdP50404 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SftpdP50404 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SftpdP50404 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.08□□□□□ -0.16
SftpdP50404 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.08□□□□□ -0.16
SftpdP50404 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.08□□□□□ -0.16
SftpdP50404 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.08□□□□□ -0.16
SftpdP50404 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpdP50404 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.07□□□□□ -0.16
SftpdP50404 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.07□□□□□ -0.16
SftpdP50404 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SftpdP50404 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SftpdP50404 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SftpdP50404 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.07□□□□□ -0.16
SftpdP50404 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SftpdP50404 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SftpdP50404 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.06□□□□□ -0.16
SftpdP50404 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SftpdP50404 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SftpdP50404 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.06□□□□□ -0.16
SftpdP50404 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.06□□□□□ -0.16
SftpdP50404 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SftpdP50404 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.06□□□□□ -0.16
SftpdP50404 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms