Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Gm15573-201ENSMUST00000119487 540 ntBASIC13.85□□□□□ -0.19
HttP42859 Gm13492-201ENSMUST00000119772 665 ntBASIC13.85□□□□□ -0.19
HttP42859 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.85□□□□□ -0.19
HttP42859 Gm10774-201ENSMUST00000188689 204 ntBASIC13.85□□□□□ -0.19
HttP42859 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.85□□□□□ -0.19
HttP42859 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HttP42859 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HttP42859 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.85□□□□□ -0.19
HttP42859 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.85□□□□□ -0.19
HttP42859 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.85□□□□□ -0.19
HttP42859 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HttP42859 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.85□□□□□ -0.19
HttP42859 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.85□□□□□ -0.19
HttP42859 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HttP42859 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HttP42859 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Gm7851-201ENSMUST00000117574 323 ntBASIC13.84□□□□□ -0.19
HttP42859 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.84□□□□□ -0.19
HttP42859 Gm19091-201ENSMUST00000208120 978 ntBASIC13.84□□□□□ -0.19
HttP42859 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.84□□□□□ -0.19
HttP42859 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.84□□□□□ -0.19
HttP42859 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.84□□□□□ -0.19
HttP42859 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HttP42859 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HttP42859 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HttP42859 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.84□□□□□ -0.19
HttP42859 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.84□□□□□ -0.19
HttP42859 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HttP42859 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HttP42859 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HttP42859 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HttP42859 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HttP42859 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
HttP42859 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HttP42859 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.83□□□□□ -0.2
HttP42859 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.83□□□□□ -0.2
HttP42859 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.83□□□□□ -0.2
HttP42859 Gm8018-201ENSMUST00000173536 789 ntBASIC13.83□□□□□ -0.2
HttP42859 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.83□□□□□ -0.2
HttP42859 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HttP42859 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HttP42859 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HttP42859 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.83□□□□□ -0.2
HttP42859 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.83□□□□□ -0.2
HttP42859 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.83□□□□□ -0.2
HttP42859 Gm45120-201ENSMUST00000208880 408 ntBASIC13.83□□□□□ -0.2
HttP42859 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HttP42859 Gm39404-201ENSMUST00000216350 313 ntBASIC13.83□□□□□ -0.2
HttP42859 Gm9139-201ENSMUST00000218817 700 ntBASIC13.83□□□□□ -0.2
HttP42859 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HttP42859 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.83□□□□□ -0.2
HttP42859 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.82□□□□□ -0.2
HttP42859 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Gm42518-201ENSMUST00000196277 938 ntBASIC13.82□□□□□ -0.2
HttP42859 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.82□□□□□ -0.2
HttP42859 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC13.82□□□□□ -0.2
HttP42859 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HttP42859 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms